Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901455.1_cds_XP_016451475.1_45823
CDS Infomation

[gene=LOC107776143] [db_xref=GeneID:107776143] [protein=chaperonin 60 subunit alpha 2, chloroplastic-like] [protein_id=XP_016451475.1] [location=complement(join(36608..36895,37251..37451,38203..38453,38960..39266,39600..39745,39853..40060,40139..40260,40638..40812,40897..40950))] [gbkey=CDS]
Sequence

ATGTCACTATCAATAATTTCACCTTTATACTTCCCTTTAAAGCTTTCTTTCTCGGAAGAA
AAAGGAAGGTGTAATTCGTGGGCGTTGGGGCAAAGCTTAGGGAAGAAGAAGATGATGGTG
GCGAGAGCTGGGCCAAAGAGAATAGCTTTTGATAAAGAATGCAGAGAAGCTTTACTTTCT
GGTATCAATAAGATTGCTGATGCTGTTTCTGTCACCTTAGGACCTAAAGGTCGCAATGTA
GTTCTCTCTGAATCTGGTGTGCTGAAAGTAATTAATGATGGTGTTACCATAGCTCAAGCC
ATAGAACTTCCAGATTCAATTGAAAATGCAGGAGTGACACTTATCAAGGAGGTTGCAACT
AAGACCAACAGTTTAGCTGGGGATGGTACAACTACTGCAATTGTTTTGGCTCGTGAGATG
GTCAAAGCTGGTTTGCTAGCTGTTGCTTTTGGGGCTAACCCTGTTTCTATGAAGAAAGGA
ATGGAGCAGACAGTAAGAGAGCTGGTCAAAATTTTGAAGAAGAAAAGCTATCCTGTTAGA
GGAAATGATGATATTAAAGCTGTAGCTTCAATATCAGCTGGAAATGATGAGTTCATTGGC
AGTTTGATTGCTGAGGCAATTAAGAAGATTGGTCCCGATGGCGTCATATGTATTGAGTCT
TCCTCATCAGCTGAAACCTCAGTCATGGTTGAAGAAGGAATGAAGATTGACAAGGGGTAC
ATGTCACCCCATTTCATCAACAATCCCAACAAATCTATAGTAGAGTTTGAAAATGCCAAA
GTTCTGGTAACCGATCAAAAGATATCTTCTGTCAAAGAAATTGTTCCTTTGCTAGAGAAG
GCCACACAGCTGAGTGTGCCACTGCTGATTTTTGCTGAGGATATTTCAAGCCAAGTGCTA
GAAACACTAGTCATTAACAAGGTGCAAGGAGTGCTTAATGTTGCTGTTGTGAAATGTCCA
GGATTTGGAGCAGGAAAGAAAGCTGTATTGCAAGACATTGCCCTGTTGACAGGTGCTGAT
TTTCTTTCTGGAGACTTAGGCCTGAATCTTGAAGGTGCAACCTCAGATCAGCTTGGTATT
GCTCGGAAAATAACAATAACAAGCAATTCTACGACCATCGTGGCTGACCCCTCCACAAAA
GCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAGTAAA
TATTTGTCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCCATATTG
AAAGTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCA
AAAAGTGCTACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTT
ATTCATCTCTCTGAACACGTACCCTTCATAAAAGAATCGTTTCAAGATCCAGATGAGCAG
ATCGGTGCTGACATAATAGGAATGGCACTTCTTGCGCCAGCAAAGCTAATAGCCGCAAAT
GCAGGAGTGGATGGAGATATAGTTGTGGAAGAAGTTAGAGGTTGTGACTGGCAAATGGGG
TATAATGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGGGTTATTGACCCTTGC
CGTGTTTCAAGGTGTGCCCTTCAGAATGCTGTCTCTGTTGCTGGTATAGTCCTAACTACT
CAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCGCTTGTCCCTCAGATTCCTGGT
ATAACTCCTTAA

Peptide Sequence

PEP ID

XP_016451475.1
PEP Infomation

PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MSLSIISPLYFPLKLSFSEEKGRCNSWALGQSLGKKKMMVARAGPKRIAFDKECREALLS
GINKIADAVSVTLGPKGRNVVLSESGVLKVINDGVTIAQAIELPDSIENAGVTLIKEVAT
KTNSLAGDGTTTAIVLAREMVKAGLLAVAFGANPVSMKKGMEQTVRELVKILKKKSYPVR
GNDDIKAVASISAGNDEFIGSLIAEAIKKIGPDGVICIESSSSAETSVMVEEGMKIDKGY
MSPHFINNPNKSIVEFENAKVLVTDQKISSVKEIVPLLEKATQLSVPLLIFAEDISSQVL
ETLVINKVQGVLNVAVVKCPGFGAGKKAVLQDIALLTGADFLSGDLGLNLEGATSDQLGI
ARKITITSNSTTIVADPSTKAEIQARIMQIKKDLAETDSKYLSEKLSQRIAKLSGGVAIL
KVGAHTETELEDRKLRIEDAKSATFAAMDEGIVPGGGATFIHLSEHVPFIKESFQDPDEQ
IGADIIGMALLAPAKLIAANAGVDGDIVVEEVRGCDWQMGYNAMTGRYEDLLASGVIDPC
RVSRCALQNAVSVAGIVLTTQAIMVEKTKEPKPLVPQIPGITP

Transcript Sequence

Gene sequence data has not been registered.